Plasmid_Backbone
Gal4::His3

Part:BBa_K3271024:Design

Designed by: Setti Belhouari   Group: iGEM19_uOttawa   (2019-10-16)


Gal4::His3-EX-RFP-SP pSB1K3 Type IIS Assembly


Assembly Compatibility:
  • 10
    INCOMPATIBLE WITH RFC[10]
    Illegal prefix found at 3304
    Illegal suffix found at 3360
  • 12
    INCOMPATIBLE WITH RFC[12]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 3304
    Illegal NheI site found at 2982
    Illegal SpeI site found at 3361
    Illegal PstI site found at 3375
    Illegal NotI site found at 3310
    Illegal NotI site found at 3368
  • 21
    INCOMPATIBLE WITH RFC[21]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal EcoRI site found at 3304
    Illegal BglII site found at 2873
    Illegal BglII site found at 2933
    Illegal XhoI site found at 1026
    Illegal XhoI site found at 2052
    Illegal XhoI site found at 3351
  • 23
    INCOMPATIBLE WITH RFC[23]
    Illegal prefix found at 3304
    Illegal suffix found at 3361
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal prefix found at 3304
    Plasmid lacks a suffix.
    Illegal XbaI site found at 3319
    Illegal SpeI site found at 3361
    Illegal PstI site found at 3375
  • 1000
    INCOMPATIBLE WITH RFC[1000]
    Plasmid lacks a prefix.
    Plasmid lacks a suffix.
    Illegal BsaI site found at 3326
    Illegal BsaI.rc site found at 3354


Design Notes

Please note the upstream and downstream Ade4 locus homologies as well as the His3 auxotrophic selection marker are found outside the prefix and suffix, not within the multiple cloning site. This contribution consists of an updated pSB1K3 BioBrick backbone that makes the BioBrick plasmids compatible with cloning in both E. coli and S. cerevisiae. This plasmid backbone is compatible with traditional and Type IIS cloning.


Source

The Gal4 upstream and downstream homologies are comprised of 100 bp each from the promoter region and the terminator region of the Gal4 locus of S. cerevisiae, respectively. The His3 auxotrophic selection marker is identical in sequence to the endogenous His3 locus of S. cerevisiae. The His3 auxotrophic selection marker is under the control of the endogenous His3 promoter and the ADH1 terminator. The RFP cassette is identical in sequence to BBa_J04450.

References